Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | BK659_07845 | Not Available | Positive | 1774843 - 1775301 | 17834.7 |
| serine 3-dehydrogenase | BK659_07850 | Not Available | Positive | 1775980 - 1777407 | 49043.9 |
| hypothetical protein | BK659_07855 | Not Available | Positive | 1777511 - 1777897 | 14199.0 |
| peptidase | BK659_07860 | Not Available | Positive | 1778114 - 1779904 | 64154.3 |
| hemolysin d | BK659_07865 | Not Available | Positive | 1779901 - 1781235 | 48946.4 |
| peptidase | BK659_07870 | Not Available | Positive | 1781238 - 1782602 | 51609.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK659_07875 | Not Available | Positive | 1782663 - 1785629 | 103492.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK659_07880 | Not Available | Positive | 1786012 - 1789107 | 106910.0 |
| polyurethanase | BK659_07885 | Not Available | Positive | 1789151 - 1790845 | 59417.8 |
| polyurethanase | BK659_07890 | Not Available | Positive | 1790948 - 1792801 | 64914.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
