Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | BK659_07745 | Not Available | Negative | 1748883 - 1749266 | 14672.8 |
| 12-oxophytodienoate reductase | BK659_07750 | Not Available | Positive | 1749369 - 1750487 | 40677.0 |
| abc transporter atp-binding protein | BK659_07755 | Not Available | Positive | 1751707 - 1752738 | 37825.0 |
| quaternary ammonium transporter | BK659_07760 | Not Available | Positive | 1752735 - 1753364 | 22737.8 |
| abc transporter permease | BK659_07765 | Not Available | Positive | 1753364 - 1754047 | 24338.4 |
| quaternary ammonium transporter | BK659_07770 | Not Available | Positive | 1754097 - 1755002 | 32114.7 |
| monooxygenase | BK659_07775 | Not Available | Positive | 1755039 - 1756367 | 49175.3 |
| hypothetical protein | BK659_07780 | Not Available | Positive | 1756411 - 1756827 | 15137.2 |
| lysr family transcriptional regulator | BK659_07785 | Not Available | Negative | 1756866 - 1757780 | 33397.6 |
| alcohol dehydrogenase | BK659_07790 | Not Available | Positive | 1758048 - 1759070 | 37072.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
