Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK659_07645 | Not Available | Negative | 1716542 - 1717795 | 44602.4 |
| diguanylate cyclase | BK659_07650 | Not Available | Positive | 1718637 - 1720025 | 52826.1 |
| n-acetylglucosaminyltransferase | BK659_07655 | Not Available | Positive | 1720028 - 1721356 | 50345.7 |
| hypothetical protein | BK659_07660 | Not Available | Positive | 1721358 - 1723478 | 79117.4 |
| hypothetical protein | BK659_07665 | Not Available | Positive | 1723486 - 1724592 | 41407.3 |
| isochorismate-pyruvate lyase | BK659_07670 | Not Available | Negative | 1724815 - 1725138 | 12440.9 |
| histidine decarboxylase | BK659_07675 | Not Available | Negative | 1725175 - 1726401 | 46214.6 |
| 2,3-dihydroxybenzoate-amp ligase | BK659_07680 | Not Available | Negative | 1726429 - 1728264 | 67503.8 |
| isochorismate synthase | BK659_07685 | Not Available | Negative | 1728291 - 1729466 | 43115.3 |
| peptide synthetase | BK659_07690 | Not Available | Positive | 1729581 - 1733939 | 160547.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
