Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase/response regulator | BK659_07595 | Not Available | Positive | 1701109 - 1704576 | 129488.0 |
| chemotaxis protein cher | BK659_07600 | Not Available | Positive | 1704614 - 1705432 | 31441.7 |
| hybrid sensor histidine kinase/response regulator | BK659_07605 | Not Available | Positive | 1705422 - 1706603 | 44403.8 |
| hypothetical protein | BK659_07610 | Not Available | Positive | 1706681 - 1707058 | 13728.8 |
| hypothetical protein | BK659_07615 | Not Available | Negative | 1707142 - 1708197 | 39059.0 |
| hypothetical protein | BK659_07620 | Not Available | Positive | 1708383 - 1710536 | 78900.5 |
| duf1656 domain-containing protein | BK659_07625 | Not Available | Positive | 1710526 - 1710726 | 7265.34 |
| efflux transporter periplasmic adaptor subunit | BK659_07630 | Not Available | Positive | 1710732 - 1711685 | 34692.5 |
| rnd transporter | BK659_07635 | Not Available | Negative | 1711929 - 1713350 | 51147.5 |
| multidrug efflux rnd transporter permease subunit | BK659_07640 | Not Available | Negative | 1713347 - 1716526 | 114679.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
