Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK659_07275 | Not Available | Positive | 1634583 - 1636250 | 59631.1 |
| multidrug transporter emra | BK659_07280 | Not Available | Positive | 1636247 - 1637398 | 40794.8 |
| copper resistance protein copd | BK659_07285 | Not Available | Negative | 1637475 - 1638353 | 31316.1 |
| hypothetical protein | BK659_07290 | Not Available | Negative | 1638357 - 1638722 | 12591.0 |
| tetr family transcriptional regulator | BK659_07295 | Not Available | Positive | 1638848 - 1639468 | 23604.3 |
| dihydropyrimidine dehydrogenase subunit b | BK659_07300 | Not Available | Negative | 1639594 - 1640868 | 46004.9 |
| dihydropyrimidine dehydrogenase | BK659_07305 | Not Available | Negative | 1640869 - 1642236 | 49449.1 |
| dihydropyrimidinase | BK659_07310 | Not Available | Negative | 1642399 - 1643838 | 52430.1 |
| nitrate reductase | BK659_07315 | Not Available | Positive | 1644461 - 1645945 | 53431.0 |
| zn-dependent hydrolase | BK659_07320 | Not Available | Positive | 1646097 - 1647380 | 45082.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
