Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l domain-containing protein | BK659_07225 | Not Available | Negative | 1619984 - 1620742 | 27996.7 |
| glycogen debranching enzyme glgx | BK659_07230 | Not Available | Negative | 1620986 - 1623145 | 81577.9 |
| hypothetical protein | BK659_07235 | Not Available | Negative | 1623268 - 1623567 | 10539.5 |
| malto-oligosyltrehalose synthase | BK659_07240 | Not Available | Negative | 1623589 - 1626375 | 104107.0 |
| 4-alpha-glucanotransferase | BK659_07245 | Not Available | Negative | 1626372 - 1628453 | 76362.4 |
| malto-oligosyltrehalose trehalohydrolase | BK659_07250 | Not Available | Negative | 1628450 - 1630255 | 67260.6 |
| starch synthase | BK659_07255 | Not Available | Negative | 1630269 - 1631837 | 56577.0 |
| mbl fold metallo-hydrolase | BK659_07260 | Not Available | Negative | 1632357 - 1633220 | 31875.9 |
| transcriptional regulator | BK659_07265 | Not Available | Positive | 1633324 - 1633659 | 12100.7 |
| hypothetical protein | BK659_07270 | Not Available | Positive | 1633699 - 1634499 | 27388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
