Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BK659_07165 | Not Available | Positive | 1593938 - 1596019 | 74733.1 |
| oxidoreductase | BK659_07170 | Not Available | Positive | 1596272 - 1597018 | 26162.4 |
| gntr family transcriptional regulator | BK659_07175 | Not Available | Negative | 1597152 - 1598561 | 52101.2 |
| cytochrome c oxidase accessory protein ccog | BK659_07180 | Not Available | Negative | 1598645 - 1600057 | 52523.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | BK659_07185 | Not Available | Positive | 1600470 - 1602464 | 75365.3 |
| maltose alpha-d-glucosyltransferase | BK659_07190 | Not Available | Positive | 1602503 - 1605859 | 125878.0 |
| 1,4-alpha-glucan branching enzyme | BK659_07195 | Not Available | Positive | 1605870 - 1608089 | 83271.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK659_07210 | Not Available | Negative | 1614300 - 1615364 | 37664.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK659_07215 | Not Available | Negative | 1616155 - 1618821 | 92460.2 |
| hypothetical protein | BK659_07220 | Not Available | Negative | 1619086 - 1619844 | 28941.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
