Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase n | BK659_06965 | Not Available | Positive | 1535493 - 1538150 | 99084.5 |
| hypothetical protein | BK659_06970 | Not Available | Positive | 1538983 - 1540035 | 36850.7 |
| rnd transporter | BK659_06975 | Not Available | Positive | 1540059 - 1542434 | 87171.0 |
| hypothetical protein | BK659_06980 | Not Available | Negative | 1542506 - 1547341 | 180820.0 |
| hypothetical protein | BK659_06985 | Not Available | Positive | 1547539 - 1547835 | 10806.3 |
| 3-carboxymuconate cyclase | BK659_06990 | Not Available | Positive | 1547828 - 1548997 | 41942.8 |
| hypothetical protein | BK659_06995 | Not Available | Positive | 1549156 - 1549335 | 6375.5 |
| hypothetical protein | BK659_07000 | Not Available | Positive | 1549788 - 1550000 | 7375.88 |
| hypothetical protein | BK659_07005 | Not Available | Positive | 1549997 - 1550254 | 8774.94 |
| glutathione s-transferase | BK659_07010 | Not Available | Negative | 1550320 - 1550955 | 24260.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
