Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK659_06865 | Not Available | Positive | 1516413 - 1517369 | 36532.8 |
| benzoate 1,2-dioxygenase large subunit | BK659_06870 | Not Available | Positive | 1517589 - 1518953 | 51891.7 |
| benzoate 1,2-dioxygenase small subunit | BK659_06875 | Not Available | Positive | 1518950 - 1519438 | 19283.5 |
| nadh oxidase | BK659_06880 | Not Available | Positive | 1519449 - 1520462 | 36350.1 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | BK659_06885 | Not Available | Positive | 1520628 - 1521401 | 27924.3 |
| dna polymerase iii subunit epsilon | BK659_06890 | Not Available | Positive | 1521489 - 1522247 | 27412.5 |
| lysine decarboxylase | BK659_06895 | Not Available | Positive | 1522514 - 1524769 | 82976.5 |
| gnat family n-acetyltransferase | BK659_06900 | Not Available | Positive | 1524784 - 1525398 | 22926.3 |
| lysr family transcriptional regulator | BK659_06905 | Not Available | Negative | 1525364 - 1526257 | 32425.9 |
| hypothetical protein | BK659_06910 | Not Available | Negative | 1526345 - 1526581 | 8392.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
