Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_06715 | Not Available | Negative | 1483664 - 1484572 | 32205.4 |
| porin | BK659_06720 | Not Available | Negative | 1485103 - 1486716 | 59203.1 |
| mfs transporter | BK659_06725 | Not Available | Positive | 1486879 - 1488171 | 47328.1 |
| glycosyl hydrolase family 32 | BK659_06730 | Not Available | Positive | 1488185 - 1489660 | 55831.6 |
| transcriptional regulator | BK659_06735 | Not Available | Positive | 1489766 - 1490764 | 36725.3 |
| hypothetical protein | BK659_06740 | Not Available | Negative | 1490798 - 1491994 | 43620.4 |
| trans-2-enoyl-coa reductase | BK659_06745 | Not Available | Positive | 1492447 - 1493643 | 43628.9 |
| hypothetical protein | BK659_06750 | Not Available | Negative | 1493725 - 1494054 | 12200.4 |
| hypothetical protein | BK659_06755 | Not Available | Positive | 1494249 - 1494449 | 7003.24 |
| hypothetical protein | BK659_06760 | Not Available | Negative | 1494519 - 1494803 | 10610.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
