Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxidase | BK659_06665 | Not Available | Negative | 1474051 - 1474704 | 24130.8 |
| Trna-gln | Not Available | Not Available | Positive | 1475004 - 1475078 | Not Available |
| deaminase | BK659_06675 | Not Available | Negative | 1475378 - 1476040 | 24073.6 |
| hypothetical protein | BK659_06680 | Not Available | Positive | 1476744 - 1477442 | 26618.3 |
| hypothetical protein | BK659_06685 | Not Available | Negative | 1477448 - 1477858 | 15586.1 |
| mate family efflux transporter | BK659_06690 | Not Available | Positive | 1478142 - 1479500 | 48083.0 |
| lactate permease | BK659_06695 | Not Available | Negative | 1479575 - 1481338 | 62786.7 |
| hypothetical protein | BK659_06700 | Not Available | Negative | 1481565 - 1481885 | 11305.5 |
| cell wall hydrolase | BK659_06705 | Not Available | Positive | 1482124 - 1482744 | 22632.8 |
| dioxygenase | BK659_06710 | Not Available | Positive | 1482843 - 1483613 | 29000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
