Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK659_06615 | Not Available | Positive | 1463244 - 1464107 | 32197.6 |
| hypothetical protein | BK659_06620 | Not Available | Positive | 1464303 - 1465049 | 27714.1 |
| hypothetical protein | BK659_06625 | Not Available | Negative | 1465288 - 1465653 | 13035.4 |
| duf4440 domain-containing protein | BK659_06630 | Not Available | Negative | 1465945 - 1466343 | 14488.2 |
| short-chain dehydrogenase | BK659_06635 | Not Available | Negative | 1466380 - 1467204 | 28697.9 |
| multidrug transporter | BK659_06640 | Not Available | Negative | 1467244 - 1467708 | 17231.0 |
| hypothetical protein | BK659_06645 | Not Available | Negative | 1467959 - 1470703 | 97774.8 |
| alkene reductase | BK659_06650 | Not Available | Negative | 1470945 - 1472015 | 38425.6 |
| lysr family transcriptional regulator | BK659_06655 | Not Available | Positive | 1472118 - 1472999 | 33076.2 |
| hypothetical protein | BK659_06660 | Not Available | Positive | 1473532 - 1473723 | 6352.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
