Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 12-oxophytodienoate reductase | BK659_06415 | Not Available | Positive | 1420087 - 1421190 | 40280.0 |
| glycoside hydrolase | BK659_06420 | Not Available | Negative | 1421299 - 1422498 | 44334.3 |
| sulfate transporter cysz | BK659_06425 | Not Available | Negative | 1422539 - 1423294 | 28290.8 |
| thioredoxin-disulfide reductase | BK659_06430 | Not Available | Positive | 1423626 - 1424588 | 34058.4 |
| hopj type iii effector protein | BK659_06435 | Not Available | Negative | 1424774 - 1425112 | 11833.8 |
| cell division protein dedd | BK659_06440 | Not Available | Negative | 1425105 - 1425401 | 11240.1 |
| dihydroneopterin triphosphate 2'-epimerase | BK659_06445 | Not Available | Negative | 1425470 - 1425841 | 13908.9 |
| gtp cyclohydrolase i fole | BK659_06450 | Not Available | Negative | 1425844 - 1426419 | 21397.0 |
| dihydromonapterin reductase | BK659_06455 | Not Available | Negative | 1426443 - 1427153 | 25400.5 |
| hypothetical protein | BK659_06460 | Not Available | Negative | 1427229 - 1428032 | 30189.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
