Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | BK659_06265 | Not Available | Positive | 1393072 - 1394418 | 47936.7 |
| phosphocarrier protein hpr | BK659_06270 | Not Available | Negative | 1394726 - 1395004 | 9886.02 |
| rnase adaptor protein rapz | BK659_06275 | Not Available | Negative | 1395020 - 1395877 | 32117.4 |
| pts iia-like nitrogen-regulatory protein ptsn | BK659_06280 | Not Available | Negative | 1395880 - 1396344 | 16876.5 |
| ribosomal subunit interface protein | BK659_06285 | Not Available | Negative | 1396357 - 1396665 | 11553.9 |
| rna polymerase factor sigma-54 | BK659_06290 | Not Available | Negative | 1396775 - 1398268 | 56641.1 |
| lps export abc transporter atp-binding protein | BK659_06295 | Not Available | Negative | 1398452 - 1399177 | 26497.1 |
| lipopolysaccharide transport periplasmic protein lpta | BK659_06300 | Not Available | Negative | 1399177 - 1399722 | 19455.4 |
| lps export abc transporter periplasmic protein lptc | BK659_06305 | Not Available | Negative | 1399709 - 1400281 | 21379.4 |
| phenylphosphate carboxylase subunit delta | BK659_06310 | Not Available | Negative | 1400289 - 1400813 | 18846.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
