Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BK659_06115 | Not Available | Negative | 1355211 - 1356812 | 59452.7 |
| abc transporter substrate-binding protein | BK659_06120 | Not Available | Negative | 1357115 - 1358740 | 60471.9 |
| abc transporter substrate-binding protein | BK659_06125 | Not Available | Negative | 1358999 - 1360600 | 59398.3 |
| hypothetical protein | BK659_06130 | Not Available | Negative | 1360895 - 1361611 | 25580.8 |
| histidine kinase | BK659_06135 | Not Available | Positive | 1361989 - 1363251 | 46842.2 |
| two-component system response regulator | BK659_06140 | Not Available | Positive | 1363244 - 1363804 | 20542.7 |
| abc transporter atp-binding protein | BK659_06145 | Not Available | Positive | 1363901 - 1365628 | 65753.9 |
| gntr family transcriptional regulator | BK659_06150 | Not Available | Positive | 1365817 - 1366566 | 27671.9 |
| hypothetical protein | BK659_06155 | Not Available | Negative | 1366733 - 1366924 | 6361.71 |
| phospholipase | BK659_06160 | Not Available | Negative | 1366939 - 1368558 | 58893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
