Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | BK659_06065 | Not Available | Positive | 1344953 - 1346536 | 59652.5 |
| duf4440 domain-containing protein | BK659_06070 | Not Available | Negative | 1346639 - 1347004 | 14020.6 |
| hypothetical protein | BK659_06075 | Not Available | Negative | 1347055 - 1347447 | 14904.2 |
| hypothetical protein | BK659_06080 | Not Available | Positive | 1347662 - 1347886 | 7680.84 |
| dipeptide abc transporter atp-binding protein | BK659_06085 | Not Available | Negative | 1347997 - 1348968 | 35866.6 |
| dipeptide abc transporter atp-binding protein dppd | BK659_06090 | Not Available | Negative | 1348968 - 1349936 | 34933.8 |
| dipeptide abc transporter permease dppc | BK659_06095 | Not Available | Negative | 1349947 - 1350858 | 32529.8 |
| peptide abc transporter permease | BK659_06100 | Not Available | Negative | 1350869 - 1351879 | 36965.3 |
| abc transporter substrate-binding protein | BK659_06105 | Not Available | Negative | 1351954 - 1353549 | 58963.2 |
| porin | BK659_06110 | Not Available | Negative | 1353628 - 1355040 | 51241.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
