Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | BK659_05960 | Not Available | Positive | 1314113 - 1315870 | 65572.4 |
| n-acetylmuramoyl-l-alanine amidase | BK659_05965 | Not Available | Positive | 1315935 - 1316495 | 20688.2 |
| hypothetical protein | BK659_05970 | Not Available | Positive | 1316492 - 1317328 | 30934.3 |
| hydrolase tatd | BK659_05980 | Not Available | Negative | 1319680 - 1320456 | 28725.7 |
| dna-binding transcriptional regulator frur | BK659_05985 | Not Available | Negative | 1320460 - 1321455 | 36575.0 |
| phosphoenolpyruvate--protein phosphotransferase | BK659_05990 | Not Available | Positive | 1321763 - 1324624 | 101556.0 |
| 1-phosphofructokinase | BK659_05995 | Not Available | Positive | 1324624 - 1325565 | 32682.3 |
| pts fructose transporter subunit iibc | BK659_06000 | Not Available | Positive | 1325577 - 1327316 | 59886.3 |
| alkaline phosphatase | BK659_06005 | Not Available | Positive | 1327501 - 1329042 | 57613.0 |
| flavodoxin | BK659_06010 | Not Available | Negative | 1329158 - 1331689 | 93035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
