Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | BK659_05810 | Not Available | Positive | 1282821 - 1283225 | 15359.5 |
| dna repair protein recn | BK659_05815 | Not Available | Negative | 1283301 - 1284974 | 61138.6 |
| nucleotide exchange factor grpe | BK659_05820 | Not Available | Positive | 1285225 - 1285791 | 20922.7 |
| molecular chaperone dnak | BK659_05825 | Not Available | Positive | 1285894 - 1287810 | 68617.7 |
| molecular chaperone dnaj | BK659_05830 | Not Available | Positive | 1288108 - 1289232 | 40226.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | BK659_05835 | Not Available | Positive | 1289243 - 1290049 | 28566.8 |
| carbamoyl phosphate synthase small subunit | BK659_05840 | Not Available | Positive | 1290308 - 1291444 | 40678.4 |
| carbamoyl phosphate synthase large subunit | BK659_05845 | Not Available | Positive | 1291584 - 1294805 | 117639.0 |
| transcription elongation factor grea | BK659_05850 | Not Available | Positive | 1294808 - 1295284 | 17376.8 |
| mfs transporter | BK659_05855 | Not Available | Positive | 1295313 - 1295717 | 14880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
