Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein b/c | BK659_05760 | Not Available | Negative | 1273401 - 1274072 | 25019.9 |
| iron-sulfur cluster-binding protein | BK659_05765 | Not Available | Negative | 1274072 - 1275526 | 53401.5 |
| oxidoreductase | BK659_05770 | Not Available | Negative | 1275523 - 1276347 | 30348.1 |
| l-lactate permease | BK659_05775 | Not Available | Negative | 1276504 - 1278192 | 59626.9 |
| transcriptional regulator pdhr | BK659_05780 | Not Available | Positive | 1278454 - 1279221 | 28965.5 |
| ssra-binding protein | BK659_05785 | Not Available | Negative | 1279379 - 1279861 | 18274.1 |
| sodium-dependent transporter | BK659_05790 | Not Available | Positive | 1279980 - 1281383 | 50671.1 |
| ubiquinone-binding protein | BK659_05795 | Not Available | Positive | 1281391 - 1281825 | 15864.0 |
| rnfh family protein | BK659_05800 | Not Available | Positive | 1281818 - 1282135 | 11354.8 |
| hypothetical protein | BK659_05805 | Not Available | Negative | 1282196 - 1282723 | 19197.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
