Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | BK659_05710 | Not Available | Negative | 1261879 - 1262451 | 22019.7 |
| acetyl-coa acetyltransferase | BK659_05715 | Not Available | Positive | 1262603 - 1263781 | 41331.6 |
| amp-dependent synthetase | BK659_05720 | Not Available | Positive | 1263784 - 1265325 | 56369.2 |
| mfs transporter | BK659_05725 | Not Available | Positive | 1265368 - 1266708 | 48219.8 |
| hypothetical protein | BK659_05730 | Not Available | Negative | 1266815 - 1267669 | 31771.8 |
| arac family transcriptional regulator | BK659_05735 | Not Available | Negative | 1267757 - 1268539 | 29143.4 |
| eama family transporter | BK659_05740 | Not Available | Positive | 1268659 - 1269531 | 31552.8 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 1269656 - 1270049 | Not Available |
| hypothetical protein | BK659_05750 | Not Available | Negative | 1270153 - 1270428 | 9632.28 |
| 4fe-4s ferredoxin | BK659_05755 | Not Available | Negative | 1270594 - 1273404 | 102022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
