Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | BK659_05555 | Not Available | Negative | 1220989 - 1221462 | 17923.7 |
| kynureninase | BK659_05560 | Not Available | Positive | 1221639 - 1222889 | 45742.8 |
| amino acid permease | BK659_05565 | Not Available | Positive | 1223142 - 1224554 | 51172.8 |
| lysr family transcriptional regulator | BK659_05570 | Not Available | Negative | 1224639 - 1225538 | 32409.9 |
| hypothetical protein | BK659_05575 | Not Available | Positive | 1225626 - 1226390 | 26383.9 |
| antibiotic biosynthesis monooxygenase | BK659_05580 | Not Available | Negative | 1226380 - 1226694 | 12589.8 |
| nadph quinone reductase mdab | BK659_05585 | Not Available | Positive | 1226897 - 1227487 | 21977.1 |
| lysr family transcriptional regulator | BK659_05590 | Not Available | Positive | 1227791 - 1228702 | 33897.6 |
| permease dsdx | BK659_05595 | Not Available | Positive | 1228913 - 1230262 | 47484.8 |
| rpir family transcriptional regulator | BK659_05600 | Not Available | Positive | 1230279 - 1231139 | 31064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
