Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_05455 | Not Available | Positive | 1198895 - 1199398 | 17890.5 |
| lysr family transcriptional regulator | BK659_05460 | Not Available | Negative | 1199395 - 1200342 | 35310.6 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK659_05465 | Not Available | Positive | 1200508 - 1202031 | 54048.3 |
| 3-hydroxyisobutyrate dehydrogenase | BK659_05470 | Not Available | Positive | 1202042 - 1202929 | 29999.5 |
| peptidase m15 | BK659_05475 | Not Available | Positive | 1203177 - 1203983 | 29715.1 |
| hypothetical protein | BK659_05480 | Not Available | Positive | 1203976 - 1204698 | 26784.9 |
| cupin | BK659_05485 | Not Available | Negative | 1204789 - 1205133 | 13145.8 |
| merr family transcriptional regulator | BK659_05490 | Not Available | Negative | 1205238 - 1205609 | 14064.1 |
| nadph:quinone reductase | BK659_05495 | Not Available | Negative | 1205663 - 1206238 | 21662.4 |
| arylformamidase | BK659_05500 | Not Available | Positive | 1206462 - 1207127 | 24201.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
