Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | BK659_05405 | Not Available | Positive | 1181444 - 1182643 | 44236.5 |
| exodeoxyribonuclease v subunit gamma | BK659_05410 | Not Available | Positive | 1183006 - 1186458 | 129867.0 |
| exodeoxyribonuclease v subunit beta | BK659_05415 | Not Available | Positive | 1186455 - 1190144 | 138428.0 |
| exodeoxyribonuclease v subunit alpha | BK659_05420 | Not Available | Positive | 1190141 - 1192228 | 76455.2 |
| amino acid abc transporter permease/atp-binding protein | BK659_05425 | Not Available | Negative | 1192298 - 1193833 | 56433.3 |
| amino acid abc transporter substrate-binding protein | BK659_05430 | Not Available | Negative | 1193933 - 1194733 | 28535.2 |
| 2og-fe(ii) oxygenase | BK659_05435 | Not Available | Negative | 1194776 - 1195834 | 38990.4 |
| xylose isomerase | BK659_05440 | Not Available | Negative | 1195847 - 1196698 | 32428.2 |
| hypothetical protein | BK659_05445 | Not Available | Positive | 1197049 - 1197624 | 20613.0 |
| diguanylate cyclase | BK659_05450 | Not Available | Positive | 1197621 - 1198889 | 45690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
