Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| demethoxyubiquinone hydroxylase family protein | BK659_05355 | Not Available | Negative | 1172432 - 1173079 | 23930.8 |
| histidine triad nucleotide-binding protein | BK659_05360 | Not Available | Negative | 1173256 - 1173594 | 12767.5 |
| short-chain dehydrogenase | BK659_05365 | Not Available | Negative | 1173677 - 1174465 | 28937.6 |
| hypothetical protein | BK659_05370 | Not Available | Negative | 1174528 - 1175448 | 32680.4 |
| 2-nitropropane dioxygenase | BK659_05375 | Not Available | Negative | 1175530 - 1176498 | 34562.6 |
| tigr00701 family protein | BK659_05380 | Not Available | Negative | 1176533 - 1176964 | 16580.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BK659_05385 | Not Available | Positive | 1177100 - 1178134 | 36701.2 |
| iron-sulfur cluster insertion protein erpa | BK659_05390 | Not Available | Positive | 1178303 - 1178653 | 12515.5 |
| anhydro-n-acetylmuramic acid kinase | BK659_05395 | Not Available | Negative | 1178721 - 1179812 | 38464.2 |
| peptidase m23 | BK659_05400 | Not Available | Negative | 1179816 - 1181234 | 51216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
