Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone djla | BK659_05255 | Not Available | Positive | 1149874 - 1150641 | 28462.3 |
| hydrolase or acyltransferase | BK659_05260 | Not Available | Negative | 1150681 - 1151673 | 35140.7 |
| histidine kinase | BK659_05265 | Not Available | Positive | 1151748 - 1154144 | 89501.2 |
| dna-binding response regulator | BK659_05270 | Not Available | Positive | 1154276 - 1154905 | 22801.1 |
| spermidine/putrescine abc transporter atp-binding protein | BK659_05275 | Not Available | Positive | 1155257 - 1156381 | 41207.7 |
| spermidine/putrescine abc transporter substrate-binding protein | BK659_05280 | Not Available | Positive | 1156430 - 1157470 | 37761.9 |
| polyamine abc transporter substrate-binding protein | BK659_05285 | Not Available | Positive | 1157625 - 1158872 | 45873.1 |
| polyamine abc transporter permease | BK659_05290 | Not Available | Positive | 1158886 - 1159710 | 29468.0 |
| alcohol dehydrogenase | BK659_05295 | Not Available | Positive | 1159914 - 1161062 | 39989.5 |
| ribulose-phosphate 3-epimerase | BK659_05300 | Not Available | Positive | 1161143 - 1161817 | 24166.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
