Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | BK659_05155 | Not Available | Negative | 1126367 - 1128214 | 69313.9 |
| dna primase | BK659_05160 | Not Available | Negative | 1128282 - 1130243 | 72948.2 |
| 30s ribosomal protein s21 | BK659_05165 | Not Available | Negative | 1130733 - 1130948 | 8386.25 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | BK659_05170 | Not Available | Positive | 1131148 - 1132173 | 36423.1 |
| glycerol-3-phosphate acyltransferase | BK659_05175 | Not Available | Negative | 1132210 - 1132779 | 20169.4 |
| dihydroneopterin aldolase | BK659_05180 | Not Available | Positive | 1132854 - 1133207 | 13094.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BK659_05185 | Not Available | Positive | 1133198 - 1133716 | 18884.9 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | BK659_05190 | Not Available | Negative | 1133831 - 1135060 | 46012.2 |
| spovr family protein | BK659_05195 | Not Available | Negative | 1135124 - 1136686 | 61124.2 |
| hypothetical protein | BK659_05200 | Not Available | Negative | 1136683 - 1137954 | 48660.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
