Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase family accessory protein fdhd | BK659_05100 | Not Available | Positive | 1115002 - 1115841 | 29869.8 |
| cbbbc protein | BK659_05105 | Not Available | Positive | 1115838 - 1118186 | 86532.6 |
| hypothetical protein | BK659_05110 | Not Available | Positive | 1118548 - 1119036 | 15675.2 |
| thioesterase | BK659_05115 | Not Available | Negative | 1119101 - 1119532 | 15900.7 |
| recombinase recq | BK659_05120 | Not Available | Negative | 1119581 - 1121527 | 73155.4 |
| serine protease | BK659_05125 | Not Available | Positive | 1121783 - 1122871 | 38471.3 |
| hypothetical protein | BK659_05130 | Not Available | Positive | 1123266 - 1123562 | 11225.4 |
| hypothetical protein | BK659_05140 | Not Available | Negative | 1124134 - 1124361 | 8244.89 |
| toxin | BK659_05145 | Not Available | Negative | 1124358 - 1125572 | 43858.9 |
| hypothetical protein | BK659_05150 | Not Available | Positive | 1125780 - 1126145 | 13944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
