Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | BK659_05050 | Not Available | Positive | 1105586 - 1106458 | 32155.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BK659_05055 | Not Available | Positive | 1106458 - 1107006 | 20693.6 |
| dtdp-4-dehydrorhamnose reductase | BK659_05060 | Not Available | Positive | 1107003 - 1107884 | 32343.2 |
| sensor histidine kinase | BK659_05065 | Not Available | Positive | 1107921 - 1109729 | 66840.8 |
| fis family transcriptional regulator | BK659_05070 | Not Available | Positive | 1109726 - 1111129 | 51054.4 |
| thioesterase | BK659_05075 | Not Available | Positive | 1111180 - 1111635 | 17031.4 |
| 3'(2'),5'-bisphosphate nucleotidase | BK659_05080 | Not Available | Negative | 1111682 - 1112518 | 29615.2 |
| adp compounds hydrolase nude | BK659_05085 | Not Available | Negative | 1112515 - 1113081 | 20862.0 |
| haloacid dehalogenase | BK659_05090 | Not Available | Positive | 1113170 - 1113832 | 25503.5 |
| lysr family transcriptional regulator | BK659_05095 | Not Available | Positive | 1114020 - 1114907 | 32888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
