Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | BK659_04945 | Not Available | Positive | 1086825 - 1088066 | 44061.5 |
| Trna-thr | Not Available | Not Available | Positive | 1088336 - 1088411 | Not Available |
| hypothetical protein | BK659_04955 | Not Available | Positive | 1088495 - 1088776 | 9977.37 |
| nuclease | BK659_04965 | Not Available | Negative | 1089331 - 1090158 | 31410.3 |
| hypothetical protein | BK659_04970 | Not Available | Negative | 1090622 - 1090906 | 10530.7 |
| alkylhydroperoxidase | BK659_04975 | Not Available | Negative | 1090911 - 1091309 | 14908.7 |
| 3-oxoacyl-acp reductase | BK659_04980 | Not Available | Negative | 1091557 - 1092267 | 24747.7 |
| disulfide bond formation protein dsba | BK659_04985 | Not Available | Negative | 1092309 - 1092965 | 24359.0 |
| 4-oxalocrotonate tautomerase | BK659_04990 | Not Available | Negative | 1092962 - 1093177 | 8047.51 |
| atpase | BK659_04995 | Not Available | Positive | 1093452 - 1094609 | 41896.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
