Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_04895 | Not Available | Positive | 1078578 - 1078994 | 15343.8 |
| hypothetical protein | BK659_04900 | Not Available | Positive | 1079001 - 1079453 | 16988.2 |
| antitoxin | BK659_04905 | Not Available | Positive | 1079647 - 1079877 | 8630.07 |
| vapc toxin family pin domain ribonuclease | BK659_04910 | Not Available | Positive | 1079877 - 1080284 | 15093.3 |
| gaba permease | BK659_04915 | Not Available | Negative | 1080356 - 1081747 | 49620.7 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK659_04920 | Not Available | Positive | 1082303 - 1083076 | 28262.2 |
| amino acid abc transporter | BK659_04925 | Not Available | Positive | 1083090 - 1083845 | 27934.1 |
| abc transporter permease | BK659_04930 | Not Available | Positive | 1083923 - 1084618 | 24954.7 |
| abc transporter permease | BK659_04935 | Not Available | Positive | 1084615 - 1085304 | 25626.3 |
| sam-dependent methyltransferase | BK659_04940 | Not Available | Positive | 1085285 - 1086514 | 45934.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
