Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | BK659_04795 | Not Available | Positive | 1058785 - 1060092 | 46122.4 |
| hypothetical protein | BK659_04800 | Not Available | Positive | 1060094 - 1060882 | 28718.8 |
| hypothetical protein | BK659_04805 | Not Available | Positive | 1061061 - 1062575 | 55368.6 |
| peptidase | BK659_04810 | Not Available | Positive | 1062713 - 1063948 | 44483.3 |
| amino acid abc transporter substrate-binding protein | BK659_04815 | Not Available | Negative | 1063952 - 1064707 | 28002.2 |
| imidazole glycerol phosphate synthase subunit hisf | BK659_04820 | Not Available | Negative | 1064774 - 1065544 | 27214.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BK659_04825 | Not Available | Negative | 1065554 - 1066291 | 25745.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | BK659_04830 | Not Available | Negative | 1066333 - 1066587 | 9972.83 |
| imidazole glycerol phosphate synthase subunit hish | BK659_04835 | Not Available | Negative | 1066587 - 1067225 | 23453.0 |
| imidazoleglycerol-phosphate dehydratase | BK659_04840 | Not Available | Negative | 1067225 - 1067818 | 21971.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
