Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | BK659_04745 | Not Available | Positive | 1049342 - 1049956 | 22510.9 |
| pas domain-containing sensor histidine kinase | BK659_04750 | Not Available | Positive | 1050187 - 1051272 | 40080.6 |
| nitrogen regulation protein nr(i) | BK659_04755 | Not Available | Positive | 1051269 - 1052705 | 53102.4 |
| hypothetical protein | BK659_04760 | Not Available | Negative | 1053184 - 1053624 | 16246.5 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | BK659_04765 | Not Available | Positive | 1053623 - 1054078 | 16933.3 |
| protein-export chaperone secb | BK659_04770 | Not Available | Negative | 1054303 - 1054785 | 17866.1 |
| glutaredoxin 3 | BK659_04775 | Not Available | Negative | 1054842 - 1055096 | 9222.09 |
| sulfurtransferase | BK659_04780 | Not Available | Negative | 1055098 - 1055511 | 14662.0 |
| phosphoglycerate mutase (2,3-diphosphoglycerate-independent) | BK659_04785 | Not Available | Positive | 1055663 - 1057192 | 55214.6 |
| peptidase m23 | BK659_04790 | Not Available | Positive | 1057458 - 1058750 | 47787.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
