Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase | BK659_04595 | Not Available | Negative | 1011881 - 1012816 | 33359.7 |
| glycine/betaine abc transporter substrate-binding protein | BK659_04600 | Not Available | Negative | 1012832 - 1013779 | 34411.5 |
| n-formylglutamate deformylase | BK659_04605 | Not Available | Negative | 1014045 - 1014848 | 29695.4 |
| imidazolonepropionase | BK659_04610 | Not Available | Negative | 1014859 - 1016064 | 43141.7 |
| proline-specific permease proy | BK659_04615 | Not Available | Negative | 1016081 - 1017487 | 50275.2 |
| histidine ammonia-lyase | BK659_04620 | Not Available | Negative | 1017595 - 1019127 | 54014.1 |
| hypothetical protein | BK659_04625 | Not Available | Negative | 1019338 - 1020162 | 30522.1 |
| abc transporter permease | BK659_04630 | Not Available | Negative | 1020159 - 1021010 | 30912.1 |
| cytosine permease | BK659_04635 | Not Available | Negative | 1021180 - 1022646 | 52264.4 |
| urocanate hydratase | BK659_04640 | Not Available | Negative | 1022824 - 1024512 | 61465.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
