Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(3-hydroxyalkanoate) granule-associated protein phaf | BK659_04495 | Not Available | Negative | 992658 - 993431 | 25902.2 |
| poly(3-hydroxyalkanoate) granule-associated protein phai | BK659_04500 | Not Available | Negative | 993442 - 993864 | 15394.5 |
| polyhydroxyalkanoic acid system protein | BK659_04505 | Not Available | Negative | 994097 - 994372 | 9823.91 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | BK659_04510 | Not Available | Positive | 994528 - 995298 | 28431.4 |
| scp2 domain-containing protein | BK659_04515 | Not Available | Positive | 995298 - 995921 | 22666.0 |
| ubiquinone biosynthesis regulatory protein kinase ubib | BK659_04520 | Not Available | Positive | 995918 - 997522 | 61333.1 |
| phosphoribosyl-amp cyclohydrolase | BK659_04525 | Not Available | Positive | 997604 - 998002 | 15368.2 |
| phosphoribosyl-atp diphosphatase | BK659_04530 | Not Available | Positive | 997995 - 998327 | 11989.2 |
| sec-independent protein translocase tata | BK659_04535 | Not Available | Positive | 998353 - 998634 | 10283.4 |
| sec-independent protein translocase tatb | BK659_04540 | Not Available | Positive | 998645 - 999094 | 15691.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
