Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | BK659_04395 | Not Available | Negative | 967043 - 969127 | 75096.7 |
| pilus assembly protein pilp | BK659_04400 | Not Available | Negative | 969141 - 969668 | 19194.9 |
| pilus assembly protein pilp | BK659_04405 | Not Available | Negative | 969665 - 970288 | 23044.8 |
| pilus assembly protein piln | BK659_04410 | Not Available | Negative | 970285 - 970851 | 20898.2 |
| pilus assembly protein pilm | BK659_04415 | Not Available | Negative | 970851 - 971915 | 38021.8 |
| peptidase | BK659_04420 | Not Available | Positive | 972129 - 974570 | 88729.9 |
| is110 family transposase | BK659_04425 | Not Available | Negative | 974797 - 976065 | 48711.7 |
| malate dehydrogenase | BK659_04430 | Not Available | Negative | 976788 - 978056 | 45231.7 |
| nuclease | BK659_04435 | Not Available | Negative | 978239 - 978988 | 26881.4 |
| 50s ribosomal protein l31 | BK659_04440 | Not Available | Negative | 979063 - 979278 | 7842.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
