Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | BK659_04345 | Not Available | Negative | 950996 - 952894 | 67860.3 |
| hypothetical protein | BK659_04350 | Not Available | Negative | 952895 - 953422 | 19077.1 |
| hypothetical protein | BK659_04355 | Not Available | Negative | 953462 - 953980 | 19868.0 |
| n-acetylglucosamine-binding protein gbpa | BK659_04360 | Not Available | Negative | 954079 - 955548 | 52567.6 |
| uroporphyrinogen decarboxylase | BK659_04365 | Not Available | Negative | 956065 - 957132 | 39015.1 |
| glutamate synthase | BK659_04370 | Not Available | Negative | 957399 - 958817 | 51768.0 |
| glutamate synthase large subunit | BK659_04375 | Not Available | Negative | 958851 - 963296 | 162288.0 |
| cell division protein | BK659_04380 | Not Available | Negative | 963645 - 965261 | 56059.1 |
| 3-dehydroquinate synthase | BK659_04385 | Not Available | Negative | 965272 - 966372 | 39756.1 |
| shikimate kinase | BK659_04390 | Not Available | Negative | 966520 - 967038 | 19223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
