Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_04295 | Not Available | Positive | 942744 - 944021 | 45492.2 |
| hypothetical protein | BK659_04300 | Not Available | Negative | 944032 - 944466 | 15646.8 |
| type ii secretory protein pull | BK659_04305 | Not Available | Negative | 944496 - 945593 | 40474.6 |
| type ii secretory protein pulk | BK659_04310 | Not Available | Negative | 945590 - 946453 | 31953.1 |
| type ii secretion system protein gspj | BK659_04315 | Not Available | Negative | 946450 - 946995 | 20855.2 |
| type ii secretion system protein gspi | BK659_04320 | Not Available | Negative | 946988 - 947380 | 14467.3 |
| type ii secretion system protein gsph | BK659_04325 | Not Available | Negative | 947373 - 947840 | 16902.5 |
| type ii secretion system protein gspg | BK659_04330 | Not Available | Negative | 947844 - 948299 | 16345.5 |
| type ii secretion system protein gspf | BK659_04335 | Not Available | Negative | 948303 - 949514 | 43327.1 |
| type ii secretion system protein gspe | BK659_04340 | Not Available | Negative | 949518 - 950999 | 53722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
