Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | BK659_04140 | Not Available | Positive | 915361 - 917040 | 62158.9 |
| glycosyl transferase | BK659_04145 | Not Available | Positive | 917190 - 917924 | 27536.6 |
| glycosyl transferase | BK659_04150 | Not Available | Positive | 917921 - 918868 | 36279.9 |
| histidine ammonia-lyase | BK659_04155 | Not Available | Positive | 918849 - 920393 | 56379.8 |
| thioesterase | BK659_04160 | Not Available | Positive | 920386 - 920811 | 16025.5 |
| hypothetical protein | BK659_04165 | Not Available | Positive | 921003 - 921569 | 20892.8 |
| hypothetical protein | BK659_04170 | Not Available | Positive | 921553 - 923892 | 83922.4 |
| sodium:proton antiporter | BK659_04175 | Not Available | Positive | 923889 - 925049 | 42195.5 |
| fad-dependent oxidoreductase | BK659_04180 | Not Available | Positive | 925036 - 926283 | 45908.3 |
| sam-dependent methyltransferase | BK659_04185 | Not Available | Positive | 926280 - 927023 | 28574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
