Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | BK659_03985 | Not Available | Negative | 871257 - 876062 | 180750.0 |
| hypothetical protein | BK659_03990 | Not Available | Negative | 876062 - 876799 | 27180.4 |
| type iv secretion protein rhs | BK659_03995 | Not Available | Negative | 876789 - 878798 | 74808.2 |
| sodium/proline symporter | BK659_04000 | Not Available | Negative | 879222 - 880706 | 52826.4 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | BK659_04005 | Not Available | Positive | 881168 - 885121 | 142608.0 |
| acyl-coa dehydrogenase | BK659_04010 | Not Available | Positive | 885379 - 887181 | 66268.1 |
| chemotaxis protein | BK659_04015 | Not Available | Negative | 887317 - 889254 | 69279.5 |
| cell division protein zapa | BK659_04020 | Not Available | Negative | 889354 - 889656 | 11049.5 |
| hypothetical protein | BK659_04025 | Not Available | Negative | 889653 - 889883 | 8188.63 |
| methyl-accepting chemotaxis protein | BK659_04030 | Not Available | Positive | 890159 - 891784 | 58713.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
