Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | BK659_03885 | Not Available | Negative | 843853 - 844983 | 41710.5 |
| carbamoyltransferase | BK659_03890 | Not Available | Negative | 844967 - 846724 | 65517.9 |
| hypothetical protein | BK659_03895 | Not Available | Negative | 846900 - 847262 | 12889.8 |
| hypothetical protein | BK659_03900 | Not Available | Positive | 847746 - 848117 | 13454.8 |
| serine/threonine protein kinase | BK659_03905 | Not Available | Negative | 848987 - 850426 | 53684.0 |
| lipopolysaccharide kinase | BK659_03910 | Not Available | Negative | 850426 - 851178 | 28939.5 |
| lipopolysaccharide core heptose(i) kinase rfap | BK659_03915 | Not Available | Negative | 851281 - 852087 | 30604.2 |
| glucosyltransferase i rfag | BK659_03920 | Not Available | Negative | 852087 - 853208 | 41975.6 |
| lipopolysaccharide heptosyltransferase i | BK659_03925 | Not Available | Negative | 853208 - 854281 | 39690.2 |
| lipopolysaccharide heptosyltransferase ii | BK659_03930 | Not Available | Negative | 854283 - 855317 | 38199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
