Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone hfq | BK659_03635 | Not Available | Negative | 787152 - 787412 | 9483.48 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BK659_03640 | Not Available | Negative | 787506 - 788477 | 35730.1 |
| dna mismatch repair protein mutl | BK659_03645 | Not Available | Negative | 788477 - 790387 | 70137.7 |
| n-acetylmuramoyl-l-alanine amidase | BK659_03650 | Not Available | Negative | 790384 - 791820 | 50568.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | BK659_03655 | Not Available | Negative | 791821 - 792291 | 17120.6 |
| bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | BK659_03660 | Not Available | Negative | 792279 - 793778 | 51331.1 |
| trna epoxyqueuosine(34) reductase queg | BK659_03665 | Not Available | Positive | 793842 - 794906 | 39762.7 |
| hypothetical protein | BK659_03670 | Not Available | Negative | 795027 - 795638 | 22451.3 |
| oligoribonuclease | BK659_03675 | Not Available | Negative | 795837 - 796379 | 20557.4 |
| ribosome biogenesis gtpase rsga | BK659_03680 | Not Available | Positive | 796487 - 797518 | 37424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
