Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflc | BK659_03435 | Not Available | Negative | 738960 - 739841 | 32896.4 |
| hflk protein | BK659_03440 | Not Available | Negative | 739838 - 740872 | 38281.7 |
| abc transporter atp-binding protein | BK659_03445 | Not Available | Negative | 741719 - 742435 | 26224.1 |
| abc transporter atp-binding protein | BK659_03450 | Not Available | Negative | 742432 - 743307 | 32384.4 |
| branched-chain amino acid abc transporter permease | BK659_03455 | Not Available | Negative | 743304 - 744602 | 46745.0 |
| branched-chain amino acid abc transporter permease livh | BK659_03460 | Not Available | Negative | 744605 - 745519 | 32583.0 |
| branched chain amino acid abc transporter substrate-binding protein | BK659_03465 | Not Available | Negative | 745711 - 746844 | 39933.8 |
| fad-dependent oxidoreductase | BK659_03470 | Not Available | Negative | 747226 - 748509 | 46326.5 |
| aldehyde dehydrogenase family protein | BK659_03475 | Not Available | Negative | 748665 - 750155 | 53741.1 |
| lysr family transcriptional regulator | BK659_03480 | Not Available | Positive | 750320 - 751231 | 34615.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
