Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_03335 | Not Available | Negative | 716529 - 717542 | 36936.2 |
| phosphate starvation-inducible protein psif | BK659_03340 | Not Available | Negative | 717806 - 718111 | 10904.6 |
| hypothetical protein | BK659_03345 | Not Available | Negative | 718263 - 722672 | 163871.0 |
| arac family transcriptional regulator | BK659_03350 | Not Available | Negative | 722933 - 723715 | 29604.3 |
| eama family transporter | BK659_03355 | Not Available | Positive | 723811 - 724698 | 31699.7 |
| alpha/beta hydrolase | BK659_03360 | Not Available | Negative | 724806 - 725696 | 32119.3 |
| qace family quaternary ammonium compound efflux smr transporter | BK659_03365 | Not Available | Negative | 725812 - 726117 | 10664.6 |
| fmn-dependent nadh-azoreductase | BK659_03370 | Not Available | Negative | 726119 - 726757 | 22963.6 |
| lysr family transcriptional regulator | BK659_03375 | Not Available | Positive | 726899 - 727825 | 34276.8 |
| hypothetical protein | BK659_03380 | Not Available | Negative | 727882 - 729957 | 74342.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
