Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-disulfide reductase dsbd | BK659_03080 | Not Available | Positive | 650067 - 651830 | 63256.6 |
| type ii 3-dehydroquinate dehydratase | BK659_03085 | Not Available | Positive | 651962 - 652414 | 16400.7 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | BK659_03090 | Not Available | Positive | 652463 - 652927 | 16397.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | BK659_03095 | Not Available | Positive | 652945 - 654309 | 49150.1 |
| ribosomal protein l11 methyltransferase | BK659_03100 | Not Available | Positive | 654615 - 655493 | 31823.7 |
| hypothetical protein | BK659_03105 | Not Available | Positive | 655524 - 656783 | 47272.4 |
| trna dihydrouridine synthase dusb | BK659_03110 | Not Available | Positive | 656981 - 657991 | 36400.0 |
| fis family transcriptional regulator | BK659_03115 | Not Available | Positive | 657988 - 658308 | 11676.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | BK659_03120 | Not Available | Positive | 658391 - 659998 | 57477.7 |
| phosphoribosylamine--glycine ligase | BK659_03125 | Not Available | Positive | 660167 - 661462 | 45525.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
