Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | BK659_03030 | Not Available | Negative | 636001 - 637440 | 52818.3 |
| arginine decarboxylase | BK659_03035 | Not Available | Negative | 637674 - 639587 | 71059.5 |
| translation initiation factor | BK659_03040 | Not Available | Negative | 639809 - 640180 | 12560.5 |
| nudix hydrolase | BK659_03045 | Not Available | Negative | 640359 - 640928 | 20912.6 |
| hypothetical protein | BK659_03050 | Not Available | Negative | 640932 - 641999 | 39536.9 |
| hypothetical protein | BK659_03055 | Not Available | Positive | 642374 - 644194 | 65819.2 |
| hypothetical protein | BK659_03060 | Not Available | Positive | 644206 - 644853 | 23799.2 |
| hypothetical protein | BK659_03065 | Not Available | Positive | 644868 - 645953 | 41557.2 |
| diguanylate cyclase response regulator | BK659_03070 | Not Available | Positive | 646209 - 647879 | 62743.1 |
| chemotaxis protein | BK659_03075 | Not Available | Positive | 647932 - 649890 | 69227.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
