Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein | BK659_02880 | Not Available | Positive | 600086 - 600853 | 27946.9 |
| iron(iii) abc transporter | BK659_02885 | Not Available | Positive | 600863 - 601714 | 30886.2 |
| competence protein tfox | BK659_02890 | Not Available | Negative | 601968 - 602240 | 10131.2 |
| hypothetical protein | BK659_02895 | Not Available | Negative | 602465 - 602809 | 12771.1 |
| hypothetical protein | BK659_02900 | Not Available | Negative | 602904 - 604460 | 57665.9 |
| penicillin-binding protein 1b | BK659_02905 | Not Available | Positive | 604578 - 606902 | 85185.3 |
| hypothetical protein | BK659_02910 | Not Available | Positive | 606919 - 607677 | 25689.3 |
| pseudouridine synthase | BK659_02915 | Not Available | Positive | 607677 - 608012 | 12937.7 |
| glycosyltransferase | BK659_02920 | Not Available | Negative | 608108 - 608530 | 15676.7 |
| acetolactate synthase, large subunit, biosynthetic type | BK659_02925 | Not Available | Positive | 608930 - 610654 | 62512.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
