Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3094 domain-containing protein | BK659_02730 | Not Available | Negative | 566487 - 566660 | 6680.32 |
| hypothetical protein | BK659_02735 | Not Available | Negative | 566764 - 567390 | 24226.0 |
| hypothetical protein | BK659_02740 | Not Available | Positive | 567522 - 568208 | 25682.0 |
| dna gyrase inhibitor yacg | BK659_02745 | Not Available | Negative | 568252 - 568452 | 7410.49 |
| dephospho-coa kinase | BK659_02750 | Not Available | Negative | 568449 - 569072 | 23065.6 |
| prepilin peptidase | BK659_02755 | Not Available | Negative | 569069 - 569941 | 32188.2 |
| type ii secretion system protein f | BK659_02760 | Not Available | Negative | 569944 - 571161 | 44200.8 |
| type iv-a pilus assembly atpase pilb | BK659_02765 | Not Available | Negative | 571165 - 572865 | 62917.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | BK659_02770 | Not Available | Positive | 573092 - 573502 | 13839.9 |
| phospholipid-binding protein | BK659_02775 | Not Available | Positive | 573818 - 574174 | 12210.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
