Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | BK659_02680 | Not Available | Negative | 556959 - 557975 | 38191.7 |
| rna pseudouridine synthase | BK659_02685 | Not Available | Positive | 558127 - 559089 | 35501.0 |
| multi-copper polyphenol oxidoreductase | BK659_02690 | Not Available | Positive | 559086 - 559811 | 25716.8 |
| atp-dependent chaperone clpb | BK659_02695 | Not Available | Positive | 559941 - 562505 | 95242.6 |
| Trna-asn | Not Available | Not Available | Positive | 562802 - 562877 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 562887 - 562963 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 562969 - 563044 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 563143 - 563219 | Not Available |
| methyl-accepting chemotaxis protein | BK659_02720 | Not Available | Positive | 563382 - 565007 | 58208.1 |
| fad-dependent oxidoreductase | BK659_02725 | Not Available | Negative | 565128 - 566426 | 46723.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
