Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gsph | BK659_02630 | Not Available | Positive | 546727 - 547200 | 16374.9 |
| type iv pilus modification protein pilv | BK659_02635 | Not Available | Positive | 547197 - 547640 | 15580.4 |
| pilus assembly protein pilw | BK659_02640 | Not Available | Positive | 547637 - 548341 | 24795.8 |
| pilus assembly protein pilx | BK659_02645 | Not Available | Positive | 548353 - 548832 | 16411.8 |
| pilus assembly protein | BK659_02650 | Not Available | Positive | 548819 - 551980 | 110732.0 |
| pilus assembly protein | BK659_02655 | Not Available | Positive | 551996 - 552397 | 14551.5 |
| glycine oxidase thio | BK659_02660 | Not Available | Positive | 552455 - 553555 | 39101.1 |
| sigma-54-dependent fis family transcriptional regulator | BK659_02665 | Not Available | Negative | 553674 - 555020 | 49991.5 |
| pas domain-containing sensor histidine kinase | BK659_02670 | Not Available | Negative | 555017 - 556606 | 58286.6 |
| hypothetical protein | BK659_02675 | Not Available | Negative | 556596 - 556832 | 9171.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
