Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(54)-c5)-methyltransferase trma | BK659_02380 | Not Available | Negative | 491061 - 492140 | 40730.5 |
| guanine permease | BK659_02385 | Not Available | Negative | 492137 - 493432 | 44781.2 |
| duf4879 domain-containing protein | BK659_02390 | Not Available | Positive | 493637 - 494095 | 16015.3 |
| dj-1 family protein | BK659_02395 | Not Available | Positive | 494177 - 494728 | 19220.9 |
| mfs transporter | BK659_02400 | Not Available | Negative | 494694 - 495977 | 45553.7 |
| cytochrome ubiquinol oxidase subunit i | BK659_02405 | Not Available | Positive | 496306 - 497739 | 53296.2 |
| cytochrome d ubiquinol oxidase subunit ii | BK659_02410 | Not Available | Positive | 497743 - 498750 | 37227.5 |
| duf2474 domain-containing protein | BK659_02415 | Not Available | Positive | 498819 - 498986 | 6257.84 |
| 50s rrna methyltransferase | BK659_02420 | Not Available | Negative | 499070 - 500194 | 40548.9 |
| hypothetical protein | BK659_02425 | Not Available | Negative | 500396 - 501112 | 26950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
